Replace the current taxonomy using the NCBI Taxonomy database

Source: R/refdb_ncbi_taxonomy.R

Replace the current taxonomy using the NCBI Taxonomy database

refdb_set_ncbitax(x)

Arguments

x

a reference database (tibble) with one or several columns giving the taxonomy of each record and explicitly indicated in the field taxonomy. See refdb_set_fields.

Value

The reference database with the NCBI taxonomy for the genus level and higher ranks. (the original taxonomy above the genus level is removed).