Export reference database for DADA2

Source: R/refdb_export.R

Write reference database in formats which can be used with the functions of the package dada2.

refdb_export_dada2(x, file, mode = "taxonomy")

Arguments

x

a reference database.
file

a path to the file to be written.
mode

character string to determine the type of file to produce. Use "taxonomy" to produce a file for function assignTaxonomy or "species" to produce a file for function assignSpecies.